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Plod3 procollagen-lysine,2-oxoglutarate 5-dioxygenase 3 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110566258, updated on 15-Mar-2024

Summary

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Gene symbol
Plod3
Gene description
procollagen-lysine,2-oxoglutarate 5-dioxygenase 3
See related
EnsemblRapid:ENSMUGG00015012281
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See Plod3 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 15 NC_083362.1 (758961..767932)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018661429.1 (86043..94687, complement)

Chromosome 15 - NC_083362.1Genomic Context describing neighboring genes Neighboring gene claudin 15 Neighboring gene zinc finger HIT-type containing 1 Neighboring gene 2-acylglycerol O-acyltransferase 2-like Neighboring gene VGF nerve growth factor inducible

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-lysine 5-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in peptidyl-lysine hydroxylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083362.1 Reference Bangor_MerUng_6.1

    Range
    758961..767932
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021664085.2 → XP_021519760.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 isoform X2

    Related
    ENSMUGP00015016517.1, ENSMUGT00015022078.1
    Conserved Domains (1) summary
    cl21496
    Location:580 → 687
    2OG-FeII_Oxy; 2OG-Fe(II) oxygenase superfamily

  2. XM_021664084.2 → XP_021519759.1  multifunctional procollagen lysine hydroxylase and glycosyltransferase LH3 isoform X1

    Conserved Domains (1) summary
    smart00702
    Location:580 → 743
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein Strain
Heading Accession and Version

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