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St3gal6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110564564, updated on 15-Mar-2024

Summary

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Gene symbol
St3gal6
Gene description
ST3 beta-galactoside alpha-2,3-sialyltransferase 6
See related
EnsemblRapid:ENSMUGG00015011051
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See St3gal6 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 17 NC_083364.1 (60514398..60568699, complement)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018660500.1 (32962..87068)

Chromosome 17 - NC_083364.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132648582 Neighboring gene small ribosomal subunit protein uS14-like Neighboring gene discoidin, CUB and LCCL domain containing 2 Neighboring gene uncharacterized LOC132648739 Neighboring gene coproporphyrinogen oxidase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-galactoside alpha-2,3-sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type 2 lactosamine alpha-2,3-sialyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083364.1 Reference Bangor_MerUng_6.1

    Range
    60514398..60568699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021662047.2 → XP_021517722.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Conserved Domains (1) summary
    pfam00777
    Location:99 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  2. XM_060370593.1 → XP_060226576.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X2

    Related
    ENSMUGP00015014740.1, ENSMUGT00015019808.1

  3. XM_021662046.2 → XP_021517721.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

    Related
    ENSMUGP00015014739.1, ENSMUGT00015019807.1
    Conserved Domains (1) summary
    pfam00777
    Location:99 → 332
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  4. XM_060370591.1 → XP_060226574.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  5. XM_060370592.1 → XP_060226575.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

  6. XM_060370590.1 → XP_060226573.1  type 2 lactosamine alpha-2,3-sialyltransferase isoform X1

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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