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Ctnnd1 catenin delta 1 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110551976, updated on 15-Mar-2024

Summary

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Gene symbol
Ctnnd1
Gene description
catenin delta 1
See related
EnsemblRapid:ENSMUGG00015017170
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See Ctnnd1 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 8 NC_083356.1 (109266476..109318270)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018658111.1 (142114..193857, complement)

Chromosome 8 - NC_083356.1Genomic Context describing neighboring genes Neighboring gene selenoprotein H Neighboring gene BTB domain containing 18 Neighboring gene uncharacterized LOC132655922 Neighboring gene uncharacterized LOC132655975 Neighboring gene tissue factor pathway inhibitor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell-cell junction assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in adherens junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
catenin delta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083356.1 Reference Bangor_MerUng_6.1

    Range
    109266476..109318270
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060390361.1 → XP_060246344.1  catenin delta-1 isoform X1

  2. XM_021642901.2 → XP_021498576.1  catenin delta-1 isoform X1

    Conserved Domains (3) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:632 → 740
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  3. XM_060390362.1 → XP_060246345.1  catenin delta-1 isoform X2

  4. XM_060390363.1 → XP_060246346.1  catenin delta-1 isoform X4

    Related
    ENSMUGP00015024100.1, ENSMUGT00015031362.1

  5. XM_060390369.1 → XP_060246352.1  catenin delta-1 isoform X11

  6. XM_021642904.2 → XP_021498579.1  catenin delta-1 isoform X3

    Related
    ENSMUGP00015024089.1, ENSMUGT00015031351.1
    Conserved Domains (2) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  7. XM_060390365.1 → XP_060246348.1  catenin delta-1 isoform X6

  8. XM_060390364.1 → XP_060246347.1  catenin delta-1 isoform X5

  9. XM_021642900.2 → XP_021498575.1  catenin delta-1 isoform X1

    Related
    ENSMUGP00015024083.1, ENSMUGT00015031345.1
    Conserved Domains (3) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:632 → 740
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  10. XM_060390366.1 → XP_060246349.1  catenin delta-1 isoform X8

  11. XM_021642912.2 → XP_021498587.1  catenin delta-1 isoform X10

    Conserved Domains (3) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:632 → 740
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  12. XM_021642908.2 → XP_021498583.1  catenin delta-1 isoform X7

    Related
    ENSMUGP00015024070.1, ENSMUGT00015031332.1
    Conserved Domains (3) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:632 → 740
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  13. XM_021642911.2 → XP_021498586.1  catenin delta-1 isoform X10

    Conserved Domains (3) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:632 → 740
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  14. XM_021642913.2 → XP_021498588.1  catenin delta-1 isoform X12

    Conserved Domains (2) summary
    smart00185
    Location:440 → 481
    ARM; Armadillo/beta-catenin-like repeats
    sd00043
    Location:368 → 393
    ARM; armadillo repeat [structural motif]

  15. XM_021642914.2 → XP_021498589.1  catenin delta-1 isoform X13

    Conserved Domains (3) summary
    smart00185
    Location:339 → 380
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:531 → 639
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:267 → 292
    ARM; armadillo repeat [structural motif]

  16. XM_021642915.2 → XP_021498590.1  catenin delta-1 isoform X13

    Conserved Domains (3) summary
    smart00185
    Location:339 → 380
    ARM; Armadillo/beta-catenin-like repeats
    cd13394
    Location:531 → 639
    Syo1_like; Fungal symportin 1 (syo1) and similar proteins
    sd00043
    Location:267 → 292
    ARM; armadillo repeat [structural motif]

  17. XM_060390368.1 → XP_060246351.1  catenin delta-1 isoform X9

    Related
    ENSMUGP00015024112.1, ENSMUGT00015031374.1
Nucleotide Protein Strain
Heading Accession and Version

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