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LOC110550381 ephrin-A3 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110550381, updated on 12-Dec-2023

Summary

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Gene symbol
LOC110550381
Gene description
ephrin-A3
See related
EnsemblRapid:ENSMUGG00015014565 EnsemblRapid:ENSMUGG00015014572
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Also known as
Efna3; Efna4
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Genomic context

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See LOC110550381 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 1 NC_083349.1 (80583894..80605667)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018657743.1 (117921..126688)

Chromosome 1 - NC_083349.1Genomic Context describing neighboring genes Neighboring gene DC-STAMP domain containing 1 Neighboring gene ADAM metallopeptidase domain 15 Neighboring gene ephrin A1 Neighboring gene solute carrier family 50 member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ephrin receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ephrin receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ephrin-A3; ephrin-A4
Names
ephrin A4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083349.1 Reference Bangor_MerUng_6.1

    Range
    80583894..80605667
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060392466.1 → XP_060248449.1  ephrin-A3 isoform X5

  2. XM_021639417.2 → XP_021495092.2  ephrin-A4 isoform X4

    Related
    ENSMUGP00015020004.1, ENSMUGT00015026452.1

  3. XM_021641435.2 → XP_021497110.1  ephrin-A3 isoform X2

    Conserved Domains (1) summary
    cl19115
    Location:31 → 133
    Cupredoxin; Cupredoxin superfamily

  4. XM_021642241.2 → XP_021497916.1  ephrin-A3 isoform X3

    Related
    ENSMUGP00015020015.1, ENSMUGT00015026463.1
    Conserved Domains (1) summary
    cd10425
    Location:31 → 158
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A

  5. XM_021640624.2 → XP_021496299.1  ephrin-A3 isoform X1

    Related
    ENSMUGP00015020011.1, ENSMUGT00015026459.1
    Conserved Domains (1) summary
    cd10425
    Location:31 → 158
    Ephrin-A_Ectodomain; Ectodomain of Ephrin A
Nucleotide Protein Strain
Heading Accession and Version

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