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Galnt16 polypeptide N-acetylgalactosaminyltransferase 16 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110546603, updated on 15-Mar-2024

Summary

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Gene symbol
Galnt16
Gene description
polypeptide N-acetylgalactosaminyltransferase 16
See related
EnsemblRapid:ENSMUGG00015013424
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See Galnt16 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 7 NC_083355.1 (87275569..87357607)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018657848.1 (445566..527360, complement)

Chromosome 7 - NC_083355.1Genomic Context describing neighboring genes Neighboring gene DDB1 and CUL4 associated factor 5 Neighboring gene small Cajal body-specific RNA 3 Neighboring gene exonuclease 3'-5' domain containing 2 Neighboring gene solute carrier family 39 member 9 Neighboring gene ERH mRNA splicing and mitosis factor Neighboring gene pleckstrin homology and coiled-coil domain containing D1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 16

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083355.1 Reference Bangor_MerUng_6.1

    Range
    87275569..87357607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060387775.1 → XP_060243758.1  polypeptide N-acetylgalactosaminyltransferase 16 isoform X1

    Related
    ENSMUGP00015018301.1, ENSMUGT00015024249.1

  2. XM_021633518.2 → XP_021489193.1  polypeptide N-acetylgalactosaminyltransferase 16 isoform X1

    Related
    ENSMUGP00015018294.1, ENSMUGT00015024242.1
    Conserved Domains (2) summary
    cd02510
    Location:126 → 420
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    pfam00652
    Location:441 → 543
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

  3. XM_060387776.1 → XP_060243759.1  polypeptide N-acetylgalactosaminyltransferase 16 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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