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Sorbs1 sorbin and SH3 domain containing 1 [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110546303, updated on 15-Mar-2024

Summary

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Gene symbol
Sorbs1
Gene description
sorbin and SH3 domain containing 1
See related
EnsemblRapid:ENSMUGG00015018248
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See Sorbs1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
38
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 1 NC_083349.1 (55021284..55247412, complement)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018657837.1 (138212..364949, complement)

Chromosome 1 - NC_083349.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA48 Neighboring gene PDZ and LIM domain 1 Neighboring gene large ribosomal subunit protein uL6-like Neighboring gene uncharacterized LOC132648012 Neighboring gene aldehyde dehydrogenase 18 family member A1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-substrate adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cell-substrate junction IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sorbin and SH3 domain-containing protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083349.1 Reference Bangor_MerUng_6.1

    Range
    55021284..55247412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060389143.1 → XP_060245126.1  sorbin and SH3 domain-containing protein 1 isoform X2

  2. XM_060389165.1 → XP_060245148.1  sorbin and SH3 domain-containing protein 1 isoform X4

  3. XM_060389157.1 → XP_060245140.1  sorbin and SH3 domain-containing protein 1 isoform X3

  4. XM_060389149.1 → XP_060245132.1  sorbin and SH3 domain-containing protein 1 isoform X2

  5. XM_060389137.1 → XP_060245120.1  sorbin and SH3 domain-containing protein 1 isoform X1

  6. XM_060389176.1 → XP_060245159.1  sorbin and SH3 domain-containing protein 1 isoform X6

    Related
    ENSMUGP00015025567.1, ENSMUGT00015033217.1

  7. XM_021633052.2 → XP_021488727.1  sorbin and SH3 domain-containing protein 1 isoform X5

    Conserved Domains (4) summary
    cd11916
    Location:713 → 771
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:534 → 588
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:608 → 665
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:239 → 279
    Sorb; Sorbin homologous domain

  8. XM_060389188.1 → XP_060245171.1  sorbin and SH3 domain-containing protein 1 isoform X8

  9. XM_060389186.1 → XP_060245169.1  sorbin and SH3 domain-containing protein 1 isoform X7

  10. XM_021633053.2 → XP_021488728.1  sorbin and SH3 domain-containing protein 1 isoform X9

    Conserved Domains (4) summary
    cd11916
    Location:657 → 715
    SH3_Sorbs1_3; Third (or C-terminal) Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11919
    Location:478 → 532
    SH3_Sorbs1_1; First Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    cd11922
    Location:552 → 609
    SH3_Sorbs1_2; Second Src Homology 3 domain of Sorbin and SH3 domain containing 1 (Sorbs1), also called ponsin
    pfam02208
    Location:239 → 279
    Sorb; Sorbin homologous domain
Nucleotide Protein Strain
Heading Accession and Version

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