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Rap1gap RAP1 GTPase activating protein [ Meriones unguiculatus (Mongolian gerbil) ]

Gene ID: 110545006, updated on 15-Mar-2024

Summary

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Gene symbol
Rap1gap
Gene description
RAP1 GTPase activating protein
See related
EnsemblRapid:ENSMUGG00015025439
Gene type
protein coding
RefSeq status
MODEL
Organism
Meriones unguiculatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Gerbillinae; Meriones
Orthologs
human mouse all
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Genomic context

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See Rap1gap in Genome Data Viewer
Location:
chromosome: 3
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_10 current Bangor_MerUng_6.1 (GCF_030254825.1) 3 NC_083351.1 (14374927..14436717, complement)
100 previous assembly MunDraft-v1.0 (GCF_002204375.1) Unplaced Scaffold NW_018657797.1 (1434810..1481188, complement)

Chromosome 3 - NC_083351.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene alkaline phosphatase, biomineralization associated Neighboring gene U6 spliceosomal RNA Neighboring gene ubiquitin specific peptidase 48 Neighboring gene low density lipoprotein receptor class A domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables GTPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of small GTPase mediated signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rap1 GTPase-activating protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030254825.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Bangor_MerUng_6.1

Genomic

  1. NC_083351.1 Reference Bangor_MerUng_6.1

    Range
    14374927..14436717 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060379257.1 → XP_060235240.1  rap1 GTPase-activating protein 1 isoform X15

  2. XM_060379258.1 → XP_060235241.1  rap1 GTPase-activating protein 1 isoform X16

    Related
    ENSMUGP00015036897.1, ENSMUGT00015046579.1

  3. XM_021630813.2 → XP_021486488.1  rap1 GTPase-activating protein 1 isoform X5

    Conserved Domains (2) summary
    pfam02145
    Location:263 → 442
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:49 → 69
    GoLoco; GoLoco motif

  4. XM_021630810.2 → XP_021486485.1  rap1 GTPase-activating protein 1 isoform X1

    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  5. XM_021630812.2 → XP_021486487.1  rap1 GTPase-activating protein 1 isoform X4

    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  6. XM_021630814.2 → XP_021486489.1  rap1 GTPase-activating protein 1 isoform X6

    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  7. XM_021630811.2 → XP_021486486.1  rap1 GTPase-activating protein 1 isoform X3

    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  8. XM_021630817.2 → XP_021486492.1  rap1 GTPase-activating protein 1 isoform X10

    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  9. XM_021630815.2 → XP_021486490.1  rap1 GTPase-activating protein 1 isoform X8

    Related
    ENSMUGP00015036890.1, ENSMUGT00015046572.1
    Conserved Domains (2) summary
    pfam02145
    Location:275 → 454
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:61 → 81
    GoLoco; GoLoco motif

  10. XM_021630816.2 → XP_021486491.1  rap1 GTPase-activating protein 1 isoform X12

    Conserved Domains (2) summary
    pfam02145
    Location:242 → 421
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:28 → 48
    GoLoco; GoLoco motif

  11. XM_060379256.1 → XP_060235239.1  rap1 GTPase-activating protein 1 isoform X13

  12. XM_021630819.2 → XP_021486494.1  rap1 GTPase-activating protein 1 isoform X14

    Related
    ENSMUGP00015036870.1, ENSMUGT00015046552.1
    Conserved Domains (2) summary
    pfam02145
    Location:242 → 421
    Rap_GAP; Rap/ran-GAP
    pfam02188
    Location:28 → 48
    GoLoco; GoLoco motif

  13. XM_060379255.1 → XP_060235238.1  rap1 GTPase-activating protein 1 isoform X11

  14. XM_060379254.1 → XP_060235237.1  rap1 GTPase-activating protein 1 isoform X9

  15. XM_060379252.1 → XP_060235235.1  rap1 GTPase-activating protein 1 isoform X2

  16. XM_060379253.1 → XP_060235236.1  rap1 GTPase-activating protein 1 isoform X7

Nucleotide Protein Strain
Heading Accession and Version

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