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LOC110538265 heparan sulfate glucosamine 3-O-sulfotransferase 2-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110538265, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110538265
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 2-like
See related
Ensembl:ENSOMYG00000003365
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110538265 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
2
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 12 NC_048576.1 (72710966..72727647)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 12 NC_035088.1 (69506350..69523953)

Chromosome 12 - NC_048576.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 8-like Neighboring gene heparan sulfate glucosamine 3-O-sulfotransferase 4 Neighboring gene ubiquitin carboxyl-terminal hydrolase 31 Neighboring gene interleukin-21 receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048576.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    72710966..72727647
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021624980.2 → XP_021480655.1  heparan sulfate glucosamine 3-O-sulfotransferase 2-like

    UniProtKB/TrEMBL
    A0A8C7M035
    Related
    ENSOMYP00000006631.1, ENSOMYT00000007356.2
    Conserved Domains (1) summary
    pfam00685
    Location:131 → 368
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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