U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gal3st1a galactose-3-O-sulfotransferase 1a [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110535753, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
gal3st1a
Gene description
galactose-3-O-sulfotransferase 1a
See related
Ensembl:ENSOMYG00000013406
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See gal3st1a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
4
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 11 NC_048575.1 (46085454..46105808, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 11 NC_035087.1 (43108107..43124937, complement)

Chromosome 11 - NC_048575.1Genomic Context describing neighboring genes Neighboring gene apoptosis inducing factor mitochondria associated 3 Neighboring gene claudin-22-like Neighboring gene leucine zipper like post translational regulator 1 Neighboring gene pescadillo Neighboring gene purinergic receptor P2X, ligand-gated ion channel, 2

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in galactosylceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in myelination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
galactosylceramide sulfotransferase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048575.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    46085454..46105808 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021620982.2 → XP_021476657.1  galactosylceramide sulfotransferase

    UniProtKB/TrEMBL
    A0A060YUC6, A0A060Z5U9, A0A8C7VIQ3
    Related
    ENSOMYP00000028537.2, ENSOMYT00000031161.2
    Conserved Domains (1) summary
    cl22970
    Location:5 → 412
    Sulfotransfer_2; Sulfotransferase family

  2. XM_021620983.2 → XP_021476658.1  galactosylceramide sulfotransferase

    UniProtKB/TrEMBL
    A0A060YUC6, A0A060Z5U9, A0A8C7VIQ3
    Conserved Domains (1) summary
    cl22970
    Location:5 → 412
    Sulfotransfer_2; Sulfotransferase family

  3. XM_021620981.2 → XP_021476656.1  galactosylceramide sulfotransferase

    UniProtKB/TrEMBL
    A0A060YUC6, A0A060Z5U9, A0A8C7VIQ3
    Conserved Domains (1) summary
    cl22970
    Location:5 → 412
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases