U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kptn kaptin (actin binding protein) [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110533483, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
kptn
Gene description
kaptin (actin binding protein)
See related
Ensembl:ENSOMYG00000006831
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kptn in Genome Data Viewer
Location:
chromosome: 10
Exon count:
12
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 10 NC_048574.1 (20822791..20833204)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 10 NC_035086.1 (16911902..16922724)

Chromosome 10 - NC_048574.1Genomic Context describing neighboring genes Neighboring gene homeobox protein otx5-like Neighboring gene H3 histone, family 3C Neighboring gene RNA-binding protein Nova-1 Neighboring gene calpain small subunit 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
KICSTOR complex protein kaptin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048574.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    20822791..20833204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021617737.2 → XP_021473412.2  KICSTOR complex protein kaptin isoform X1

    UniProtKB/TrEMBL
    A0A060W1C6, A0A8C7NWV5
    Related
    ENSOMYP00000013757.2, ENSOMYT00000015230.2

  2. XM_021617738.2 → XP_021473413.2  KICSTOR complex protein kaptin isoform X2

    UniProtKB/TrEMBL
    A0A8C7NWI1
    Related
    ENSOMYP00000013806.2, ENSOMYT00000015283.2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.