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LOC110533469 adapter molecule crk [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110533469, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110533469
Gene description
adapter molecule crk
See related
Ensembl:ENSOMYG00000001569
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110533469 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 10 NC_048574.1 (19904704..19914500)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 10 NC_035086.1 (15982911..15991775)

Chromosome 10 - NC_048574.1Genomic Context describing neighboring genes Neighboring gene polymerase delta-interacting protein 2 Neighboring gene leucine-rich repeat-containing protein 75A-like Neighboring gene 14-3-3E2 protein Neighboring gene glutamate receptor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
adapter molecule crk

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048574.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    19904704..19914500
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021617703.2 → XP_021473378.1  adapter molecule crk

    UniProtKB/TrEMBL
    A0A060YHL6, A0A8C7PW55
    Related
    ENSOMYP00000002927.1, ENSOMYT00000003266.2
    Conserved Domains (3) summary
    cd09926
    Location:5 → 115
    SH2_CRK_like; Src homology 2 domain found in cancer-related signaling adaptor protein CRK
    cd11758
    Location:139 → 193
    SH3_CRK_N; N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
    cd11759
    Location:247 → 303
    SH3_CRK_C; C-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins
Nucleotide Protein
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