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cep104 centrosomal protein 104 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110531204, updated on 15-Mar-2024

Summary

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Gene symbol
cep104
Gene description
centrosomal protein 104
See related
Ensembl:ENSOMYG00000044449
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See cep104 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
23
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 9 NC_048573.1 (54247726..54294920, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 9 NC_035085.1 (47066007..47109648, complement)

Chromosome 9 - NC_048573.1Genomic Context describing neighboring genes Neighboring gene DNA fragmentation factor subunit beta Neighboring gene uncharacterized LOC110532394 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7-like Neighboring gene leucine-rich repeat-containing protein 47 Neighboring gene small integral membrane protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cilium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
centrosomal protein of 104 kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048573.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    54247726..54294920 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036988336.1 → XP_036844231.1  centrosomal protein of 104 kDa isoform X2

    UniProtKB/TrEMBL
    A0A060W1G8

  2. XM_036988334.1 → XP_036844229.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A060W1G8, A0A8K9XGC0
    Related
    ENSOMYP00000132479.1, ENSOMYT00000133543.1

  3. XM_036988335.1 → XP_036844230.1  centrosomal protein of 104 kDa isoform X1

    UniProtKB/TrEMBL
    A0A060W1G8, A0A8K9XGC0
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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