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LOC110529771 alpha-(1,6)-fucosyltransferase [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110529771, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110529771
Gene description
alpha-(1,6)-fucosyltransferase
See related
Ensembl:ENSOMYG00000026882
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
fut8
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Genomic context

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See LOC110529771 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
10
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 8 NC_048572.1 (30529289..30687478, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 8 NC_035084.1 (27354011..27510392, complement)

Chromosome 8 - NC_048572.1Genomic Context describing neighboring genes Neighboring gene MAGUK p55 subfamily member 5-A Neighboring gene gephyrin Neighboring gene uncharacterized LOC118965506 Neighboring gene uncharacterized LOC118965507 Neighboring gene transmembrane protein 121

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycoprotein 6-alpha-L-fucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-glycan fucosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi cisterna membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-(1,6)-fucosyltransferase
Names
fucosyltransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048572.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    30529289..30687478 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036985273.1 → XP_036841168.1  alpha-(1,6)-fucosyltransferase

    UniProtKB/TrEMBL
    A0A8C7RY08, A0A8K9UM33
    Related
    ENSOMYP00000058230.2, ENSOMYT00000063390.2
    Conserved Domains (2) summary
    cd11300
    Location:176 → 501
    Fut8_like; Alpha 1-6-fucosyltransferase
    cd11792
    Location:508 → 562
    SH3_Fut8; Src homology 3 domain of Alpha1,6-fucosyltransferase (Fut8)
Nucleotide Protein
Heading Accession and Version

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