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LOC110529380 C-terminal-binding protein 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110529380, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110529380
Gene description
C-terminal-binding protein 2
See related
Ensembl:ENSOMYG00000026523
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110529380 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
16
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 1 NC_048565.1 (74996783..75112403)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 1 NC_035077.1 (71074115..71094848)

Chromosome 1 - NC_048565.1Genomic Context describing neighboring genes Neighboring gene putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX32 Neighboring gene erythroid differentiation regulatory factor 1 Neighboring gene ubiquitin thioesterase Zranb1 Neighboring gene BRISC complex subunit Abraxas 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2; YLP motif-containing protein 1; histone acetyltransferase p300

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048565.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    74996783..75112403
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036985346.1 → XP_036841241.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8K9XK01
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_036985351.1 → XP_036841246.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8K9XK01
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_036985342.1 → XP_036841237.1  C-terminal-binding protein 2 isoform X4

    UniProtKB/TrEMBL
    A0A8K9XK01
    Related
    ENSOMYP00000057577.1, ENSOMYT00000062672.2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_036985339.1 → XP_036841234.1  histone acetyltransferase p300 isoform X3

    UniProtKB/TrEMBL
    A0A8C7VZG8
    Conserved Domains (1) summary
    cd05299
    Location:680 → 998
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_036985318.1 → XP_036841213.1  YLP motif-containing protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C7RX55
    Related
    ENSOMYP00000058220.2, ENSOMYT00000063380.2
    Conserved Domains (1) summary
    cd05299
    Location:680 → 998
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_036985338.1 → XP_036841233.1  histone acetyltransferase p300 isoform X2

    UniProtKB/TrEMBL
    A0A8C7VZG8
    Related
    ENSOMYP00000058223.2, ENSOMYT00000063383.2
    Conserved Domains (1) summary
    cd05299
    Location:680 → 998
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. XM_036985334.1 → XP_036841229.1  histone acetyltransferase p300 isoform X2

    UniProtKB/TrEMBL
    A0A8C7VZG8
    Conserved Domains (1) summary
    cd05299
    Location:680 → 998
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  8. XM_021611524.2 → XP_021467199.1  C-terminal-binding protein 2 isoform X5

    UniProtKB/TrEMBL
    A0A8C7UNU5
    Related
    ENSOMYP00000058240.1, ENSOMYT00000063399.2
    Conserved Domains (1) summary
    cd05299
    Location:22 → 340
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

RNA

  1. XR_005052858.1 RNA Sequence

Nucleotide Protein
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