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tent2 terminal nucleotidyltransferase 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110526145, updated on 11-Apr-2024

Summary

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Gene symbol
tent2
Gene description
terminal nucleotidyltransferase 2
See related
Ensembl:ENSOMYG00000001690
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
papd4
Orthologs
human zebrafish all
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Genomic context

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See tent2 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
15
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 6 NC_048570.1 (51800346..51843341, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 6 NC_035082.1 (47389662..47432421, complement)

Chromosome 6 - NC_048570.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118964909 Neighboring gene cardiomyopathy associated 5 Neighboring gene homer scaffold protein 1b Neighboring gene uncharacterized LOC110493840

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. Salem M, et al. BMC Genomics, 2010 Oct 13. PMID 20942956, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables poly(A) RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
poly(A) RNA polymerase GLD2
Names
poly(A) RNA polymerase D4, non-canonical

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048570.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    51800346..51843341 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021606785.2 → XP_021462460.2  poly(A) RNA polymerase GLD2

    UniProtKB/TrEMBL
    A0A060YK06, A0A8C7LT34
    Related
    ENSOMYP00000003462.2, ENSOMYT00000003885.2
    Conserved Domains (2) summary
    PHA03247
    Location:3 → 163
    PHA03247; large tegument protein UL36; Provisional
    COG5260
    Location:187 → 472
    TRF4; DNA polymerase sigma [Replication, recombination and repair]
Nucleotide Protein
Heading Accession and Version

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