U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110525108 histo-blood group ABO system transferase 1-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110525108, updated on 14-Dec-2023

Summary

Gene symbol
LOC110525108
Gene description
histo-blood group ABO system transferase 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See LOC110525108 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 6 NC_048570.1 (17136421..17137306, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 6 NC_035082.1 (13951939..13952826, complement)

Chromosome 6 - NC_048570.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118964847 Neighboring gene cell wall protein DAN4 Neighboring gene endonuclease G Neighboring gene netrin g2a Neighboring gene mediator complex subunit 27

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
PubMed 
involved_in lipid glycosylation IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
histo-blood group ABO system transferase 1-like

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048570.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    17136421..17137306 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021605055.2XP_021460730.2  histo-blood group ABO system transferase 1-like

    Conserved Domains (1) summary
    cl11394
    Location:1110
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold