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LOC110512418 chitobiosyldiphosphodolichol beta-mannosyltransferase-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110512418, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110512418
Gene description
chitobiosyldiphosphodolichol beta-mannosyltransferase-like
See related
Ensembl:ENSOMYG00000011845
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110512418 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
13
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 12 NC_048576.1 (96618239..96633339)
100 previous assembly Omyk_1.0 (GCF_002163495.1) Unplaced Scaffold NW_018539784.1 (7..2316, complement)

Chromosome 12 - NC_048576.1Genomic Context describing neighboring genes Neighboring gene tetratricopeptide repeat protein 30A Neighboring gene UPF0764 protein C16orf89 homolog Neighboring gene uncharacterized LOC118937803 Neighboring gene phosphatidylinositol glycan anchor biosynthesis, class Q Neighboring gene eukaryotic elongation factor 2 lysine methyltransferase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
chitobiosyldiphosphodolichol beta-mannosyltransferase-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048576.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    96618239..96633339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036939380.1 → XP_036795275.1  chitobiosyldiphosphodolichol beta-mannosyltransferase-like

    UniProtKB/TrEMBL
    A0A8C7PMP4, A0A8K9XZI3
    Related
    ENSOMYP00000025030.2, ENSOMYT00000027406.2
    Conserved Domains (1) summary
    cd03816
    Location:59 → 491
    GT33_ALG1-like; chitobiosyldiphosphodolichol beta-mannosyltransferase and similar proteins
Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases