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LOC110512013 C-terminal-binding protein 1 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110512013, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110512013
Gene description
C-terminal-binding protein 1
See related
Ensembl:ENSOMYG00000016914
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110512013 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
10
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 14 NC_048578.1 (732078..751620)
100 previous assembly Omyk_1.0 (GCF_002163495.1) Unplaced Scaffold NW_018536462.1 (14..1462, complement)

Chromosome 14 - NC_048578.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118938771 Neighboring gene E3 ubiquitin-protein transferase MAEA Neighboring gene transmembrane emp24 domain-containing protein 11 Neighboring gene uncharacterized LOC110488511 Neighboring gene fibroblast growth factor receptor-like 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048578.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    732078..751620
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036942664.1 → XP_036798559.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C7RTZ6, A0A8K9WUL5
    Related
    ENSOMYP00000141570.1, ENSOMYT00000125808.1
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_036942663.1 → XP_036798558.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C7RTZ6, A0A8K9XER7
    Related
    ENSOMYP00000132098.1, ENSOMYT00000130391.1
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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