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LOC110508309 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110508309, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110508309
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2
See related
Ensembl:ENSOMYG00000053328
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110508309 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 1 NC_048565.1 (87773812..87825477, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 28 NC_035104.1 (787476..816810)

Chromosome 1 - NC_048565.1Genomic Context describing neighboring genes Neighboring gene dentin sialophosphoprotein-like Neighboring gene EH domain-binding protein 1-like Neighboring gene uncharacterized LOC110531505 Neighboring gene uncharacterized LOC118966052

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048565.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    87773812..87825477 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036988035.1 → XP_036843930.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase

  2. XM_036988037.1 → XP_036843932.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Related
    ENSOMYP00000137833.1, ENSOMYT00000128751.1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase

  3. XM_036988030.1 → XP_036843925.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase

  4. XM_036988027.1 → XP_036843922.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase

  5. XM_036988016.1 → XP_036843911.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase

  6. XM_036988023.1 → XP_036843918.1  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2

    UniProtKB/TrEMBL
    A0A8K9XTU1
    Conserved Domains (1) summary
    cl21608
    Location:171 → 363
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
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