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LOC110504746 C-terminal-binding protein 1 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110504746, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110504746
Gene description
C-terminal-binding protein 1
See related
Ensembl:ENSOMYG00000044943
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Also known as
ctbp1
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Genomic context

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See LOC110504746 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
12
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 31 NC_050571.1 (19182662..19200820)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 25 NC_035101.1 (15491399..15510817)

Chromosome 31 - NC_050571.1Genomic Context describing neighboring genes Neighboring gene NK1 transcription factor related 2-like,b Neighboring gene UV-stimulated scaffold protein A Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene spondin 2b, extracellular matrix protein Neighboring gene probable E3 SUMO-protein ligase RNF212

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_050571.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    19182662..19200820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021583552.2 → XP_021439227.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C7UY26, A0A8C7UY94
    Related
    ENSOMYP00000099127.1, ENSOMYT00000107601.2
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_021583553.2 → XP_021439228.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C7UY94
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_021583554.2 → XP_021439229.1  C-terminal-binding protein 1 isoform X3

    UniProtKB/TrEMBL
    A0A8C7UY94
    Related
    ENSOMYP00000099211.1, ENSOMYT00000107685.2
    Conserved Domains (1) summary
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_021583551.2 → XP_021439226.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A060Y0R0, A0A8C7UJ87
    Related
    ENSOMYP00000099131.1, ENSOMYT00000107605.2
    Conserved Domains (1) summary
    cd05299
    Location:28 → 346
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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