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LOC110504664 N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110504664, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110504664
Gene description
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like
See related
Ensembl:ENSOMYG00000056160
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110504664 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
2
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 31 NC_050571.1 (16831665..16838842, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 25 NC_035101.1 (13201091..13202967)

Chromosome 31 - NC_050571.1Genomic Context describing neighboring genes Neighboring gene cathepsin F Neighboring gene leucine-rich repeat extensin-like protein 3 Neighboring gene pro-neuregulin-2, membrane-bound isoform-like Neighboring gene transcriptional activator protein Pur-alpha

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_050571.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    16831665..16838842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021583433.2 → XP_021439108.2  N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 2-like

    UniProtKB/TrEMBL
    A0A8K9X4Z1
    Related
    ENSOMYP00000127724.1, ENSOMYT00000130116.1
    Conserved Domains (1) summary
    cl21608
    Location:203 → 407
    Galactosyl_T; Galactosyltransferase
Nucleotide Protein
Heading Accession and Version

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