U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110504407 C-terminal-binding protein 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110504407, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC110504407
Gene description
C-terminal-binding protein 2
See related
Ensembl:ENSOMYG00000074318
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110504407 in Genome Data Viewer
Location:
chromosome: 31
Exon count:
14
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 31 NC_050571.1 (23804000..23826846, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 25 NC_035101.1 (19851002..19879126, complement)

Chromosome 31 - NC_050571.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B Neighboring gene spondin-2 Neighboring gene proline-rich protein 36-like Neighboring gene protein FAM53C Neighboring gene uncharacterized LOC110504805

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Characterization of the rainbow trout transcriptome using Sanger and 454-pyrosequencing approaches. Salem M, et al. BMC Genomics, 2010 Oct 13. PMID 20942956, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
C-terminal-binding protein 1; C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_050571.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    23804000..23826846 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036970437.1 → XP_036826332.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8L0DNS2
    Related
    ENSOMYP00000127817.1, ENSOMYT00000161207.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_036970434.1 → XP_036826329.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8K9XYH9, A0A8L0DNS2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_036970435.1 → XP_036826330.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8K9XYH9, A0A8L0DNS2
    Related
    ENSOMYP00000140868.1, ENSOMYT00000121926.1
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_036970436.1 → XP_036826331.1  C-terminal-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8K9XYH9, A0A8L0DNS2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_036970438.1 → XP_036826333.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8K9XAY2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases