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LOC110504013 gamma-sarcoglycan-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110504013, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110504013
Gene description
gamma-sarcoglycan-like
See related
Ensembl:ENSOMYG00000035538
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110504013 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
8
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 24 NC_048588.1 (21684637..21703459, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 24 NC_035100.1 (20720232..20733786, complement)

Chromosome 24 - NC_048588.1Genomic Context describing neighboring genes Neighboring gene tumor necrosis factor receptor superfamily member 19 Neighboring gene sacsin molecular chaperone Neighboring gene 40S ribosomal protein S25 Neighboring gene trafficking protein particle complex subunit 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cardiac muscle tissue development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in heart contraction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of sarcoglycan complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sarcolemma IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gamma-sarcoglycan-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048588.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    21684637..21703459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036962182.1 → XP_036818077.1  gamma-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A8C7T8B1
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein

  2. XM_036962181.1 → XP_036818076.1  gamma-sarcoglycan-like

    UniProtKB/TrEMBL
    A0A8C7T8B1
    Related
    ENSOMYP00000076843.2, ENSOMYT00000083639.2
    Conserved Domains (1) summary
    pfam04790
    Location:25 → 278
    Sarcoglycan_1; Sarcoglycan complex subunit protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases