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LOC110501489 UDP-glucuronosyltransferase [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110501489, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110501489
Gene description
UDP-glucuronosyltransferase
See related
Ensembl:ENSOMYG00000030264
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110501489 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
5
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 22 NC_048586.1 (15946465..15957499, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 22 NC_035098.1 (15660082..15671047, complement)

Chromosome 22 - NC_048586.1Genomic Context describing neighboring genes Neighboring gene UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1b Neighboring gene uncharacterized LOC110501488 Neighboring gene xin actin binding repeat containing 2b Neighboring gene cysteine-serine-rich nuclear protein 3 Neighboring gene UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3) Neighboring gene tetratricopeptide repeat domain 21B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-glucuronosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048586.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    15946465..15957499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021579090.2 → XP_021434765.2  UDP-glucuronosyltransferase

    UniProtKB/TrEMBL
    A0A060VSE8, A0A8C7W2Z7
    Related
    ENSOMYP00000065319.2, ENSOMYT00000071146.2
    Conserved Domains (1) summary
    pfam00201
    Location:50 → 542
    UDPGT; UDP-glucoronosyl and UDP-glucosyl transferase
Nucleotide Protein
Heading Accession and Version

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