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poglut1 protein O-glucosyltransferase 1 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110495774, updated on 15-Mar-2024

Summary

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Gene symbol
poglut1
Gene description
protein O-glucosyltransferase 1
See related
Ensembl:ENSOMYG00000016525
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See poglut1 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 18 NC_048582.1 (19969508..19975011)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 18 NC_035094.1 (12973942..12979366)

Chromosome 18 - NC_048582.1Genomic Context describing neighboring genes Neighboring gene vang-like protein 1 Neighboring gene calsequestrin-2 Neighboring gene translocase of inner mitochondrial membrane domain containing 1 Neighboring gene multidrug resistance-associated protein 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of Notch signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein O-glucosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048582.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    19969508..19975011
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021571195.2 → XP_021426870.1  protein O-glucosyltransferase 1

    UniProtKB/TrEMBL
    A0A060WP52, A0A8C7QCB5, A0A8C7QDL6
    Related
    ENSOMYP00000035620.2, ENSOMYT00000038845.2
    Conserved Domains (1) summary
    cl23835
    Location:48 → 382
    Glyco_transf_90; Glycosyl transferase family 90
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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