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LOC110495388 cobalamin trafficking protein CblD [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110495388, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110495388
Gene description
cobalamin trafficking protein CblD
See related
Ensembl:ENSOMYG00000058850
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110495388 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
9
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 7 NC_048571.1 (7624474..7632875)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 18 NC_035094.1 (1301027..1307269, complement)

Chromosome 7 - NC_048571.1Genomic Context describing neighboring genes Neighboring gene 18S ribosomal RNA Neighboring gene 5.8S ribosomal RNA Neighboring gene ly6/PLAUR domain-containing protein 6 Neighboring gene cyclic nucleotide-gated cation channel beta-1-like Neighboring gene kinesin heavy chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cobalamin trafficking protein CblD

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048571.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    7624474..7632875
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036982331.1 → XP_036838226.1  cobalamin trafficking protein CblD

    UniProtKB/TrEMBL
    A0A8C7STT5, A0A8C7STV9, A0A8C7W4V5
    Related
    ENSOMYP00000074000.2, ENSOMYT00000080564.2
    Conserved Domains (1) summary
    pfam10229
    Location:26 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_036982333.1 → XP_036838228.1  cobalamin trafficking protein CblD

    UniProtKB/TrEMBL
    A0A8C7STT5, A0A8C7STV9, A0A8C7W4V5
    Conserved Domains (1) summary
    pfam10229
    Location:26 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  3. XM_036982332.1 → XP_036838227.1  cobalamin trafficking protein CblD

    UniProtKB/TrEMBL
    A0A8C7STT5, A0A8C7STV9, A0A8C7W4V5
    Conserved Domains (1) summary
    pfam10229
    Location:26 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
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