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LOC110495135 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110495135, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110495135
Gene description
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110495135 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
18
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 17 NC_048581.1 (29524398..29683158, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 17 NC_035093.1 (14907764..15070864, complement)

Chromosome 17 - NC_048581.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC118940393 Neighboring gene immunoglobulin kappa light chain Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC110493665 Neighboring gene E3 ubiquitin-protein ligase TRIM39

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048581.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    29524398..29683158 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036949664.1 → XP_036805559.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X2

    UniProtKB/TrEMBL
    A0A8C7R0Z0
    Conserved Domains (1) summary
    pfam15024
    Location:184 → 792
    Glyco_transf_18; Glycosyltransferase family 18

  2. XM_036949663.1 → XP_036805558.1  alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like isoform X1

    UniProtKB/TrEMBL
    A0A8C7R0Z0
    Conserved Domains (1) summary
    pfam15024
    Location:184 → 793
    Glyco_transf_18; Glycosyltransferase family 18
Nucleotide Protein
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