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agtrap angiotensin II receptor-associated protein [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110494435, updated on 15-Mar-2024

Summary

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Gene symbol
agtrap
Gene description
angiotensin II receptor-associated protein
See related
Ensembl:ENSOMYG00000015085
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See agtrap in Genome Data Viewer
Location:
chromosome: 17
Exon count:
7
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 17 NC_048581.1 (66961091..66967191)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 17 NC_035093.1 (51097233..51103627)

Chromosome 17 - NC_048581.1Genomic Context describing neighboring genes Neighboring gene transcription factor HES-5-like Neighboring gene pantothenate kinase 4 (inactive) Neighboring gene draxin-A Neighboring gene 60S ribosomal protein L22 Neighboring gene chromodomain-helicase-DNA-binding protein 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in angiotensin-activated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of blood pressure IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type-1 angiotensin II receptor-associated protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048581.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    66961091..66967191
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021569461.2 → XP_021425136.1  type-1 angiotensin II receptor-associated protein isoform X1

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 161
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  2. XM_021569462.2 → XP_021425137.1  type-1 angiotensin II receptor-associated protein isoform X2

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 160
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  3. XM_036950484.1 → XP_036806379.1  type-1 angiotensin II receptor-associated protein isoform X6

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 128
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  4. XM_021569465.2 → XP_021425140.1  type-1 angiotensin II receptor-associated protein isoform X5

    UniProtKB/TrEMBL
    A0A8C7Q6U2
    Related
    ENSOMYP00000032191.1, ENSOMYT00000035109.2
    Conserved Domains (1) summary
    pfam06396
    Location:9 → 127
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  5. XM_021569464.2 → XP_021425139.1  type-1 angiotensin II receptor-associated protein isoform X4

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 158
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  6. XM_021569466.2 → XP_021425141.1  type-1 angiotensin II receptor-associated protein isoform X7

    Conserved Domains (1) summary
    pfam06396
    Location:9 → 144
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)

  7. XM_021569463.2 → XP_021425138.1  type-1 angiotensin II receptor-associated protein isoform X3

    UniProtKB/TrEMBL
    A0A060W7D0
    Related
    ENSOMYP00000032202.1, ENSOMYT00000035121.2
    Conserved Domains (1) summary
    pfam06396
    Location:9 → 159
    AGTRAP; Angiotensin II, type I receptor-associated protein (AGTRAP)
Nucleotide Protein
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