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ntpcr nucleoside-triphosphatase, cancer-related [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110491231, updated on 15-Mar-2024

Summary

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Gene symbol
ntpcr
Gene description
nucleoside-triphosphatase, cancer-related
See related
Ensembl:ENSOMYG00000006273
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See ntpcr in Genome Data Viewer
Location:
chromosome: 16
Exon count:
6
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 16 NC_048580.1 (427394..442801, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 16 NC_035092.1 (2265073..2287104, complement)

Chromosome 16 - NC_048580.1Genomic Context describing neighboring genes Neighboring gene kelch domain-containing protein 3 Neighboring gene uncharacterized LOC110491220 Neighboring gene signal-induced proliferation-associated 1-like protein 2 Neighboring gene microtubule associated protein 10

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome-Wide Discovery of Long Non-Coding RNAs in Rainbow Trout. Al-Tobasei R, et al. PLoS One, 2016. PMID 26895175, Free PMC Article
  2. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cancer-related nucleoside-triphosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048580.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    427394..442801 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036945903.1 → XP_036801798.1  cancer-related nucleoside-triphosphatase isoform X3

    Conserved Domains (1) summary
    cl38936
    Location:41 → 95
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  2. XM_036945901.1 → XP_036801796.1  cancer-related nucleoside-triphosphatase isoform X1

    UniProtKB/TrEMBL
    A0A8C7NUI5
    Conserved Domains (1) summary
    pfam03266
    Location:41 → 213
    NTPase_1

  3. XM_036945902.1 → XP_036801797.1  cancer-related nucleoside-triphosphatase isoform X2

    UniProtKB/TrEMBL
    A0A8C7NUI5, A0A8K9V756
    Related
    ENSOMYP00000121347.1, ENSOMYT00000147000.1
    Conserved Domains (1) summary
    pfam03266
    Location:4 → 184
    NTPase_1
Nucleotide Protein
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