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alg8 ALG8 alpha-1,3-glucosyltransferase [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110490095, updated on 18-Sep-2024

Summary

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Gene symbol
alg8
Gene description
ALG8 alpha-1,3-glucosyltransferase
See related
Ensembl:ENSOMYG00000047129
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
Orthologs
human zebrafish all
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Genomic context

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See alg8 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
14
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 15 NC_048579.1 (42696715..42725617)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 15 NC_035091.1 (38597940..38627514)

Chromosome 15 - NC_048579.1Genomic Context describing neighboring genes Neighboring gene nuclear cap binding subunit 3 Neighboring gene small nucleolar RNA SNORA57 Neighboring gene PCF11 cleavage and polyadenylation factor subunit Neighboring gene coiled-coil domain containing 90B Neighboring gene guanylate cyclase activator 1d Neighboring gene rap1 GTPase-activating protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048579.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    42696715..42725617
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021563254.2 → XP_021418929.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1

    UniProtKB/TrEMBL
    A0A8C7UU10, A0A8C7VAT6
    Related
    ENSOMYP00000105161.1, ENSOMYT00000113989.2
    Conserved Domains (1) summary
    pfam03155
    Location:51 → 535
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family

  2. XM_036944391.1 → XP_036800286.1  probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2

    UniProtKB/TrEMBL
    A0A8C7VAT6
    Conserved Domains (1) summary
    pfam03155
    Location:53 → 458
    Alg6_Alg8; ALG6, ALG8 glycosyltransferase family
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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