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LOC110488592 C-terminal-binding protein 2 [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110488592, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110488592
Gene description
C-terminal-binding protein 2
See related
Ensembl:ENSOMYG00000076089
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110488592 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
12
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 14 NC_048578.1 (4899527..4922510, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 14 NC_035090.1 (47380526..47390906, complement)

Chromosome 14 - NC_048578.1Genomic Context describing neighboring genes Neighboring gene lysine-specific demethylase 3B Neighboring gene spondin-2 Neighboring gene protein FAM53C Neighboring gene 5-phosphohydroxy-L-lysine phospho-lyase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 1; C-terminal-binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048578.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    4899527..4922510 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036942719.1 → XP_036798614.1  C-terminal-binding protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C7QF97, A0A8C7QG29
    Related
    ENSOMYP00000037754.2, ENSOMYT00000041232.2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_036942720.1 → XP_036798615.1  C-terminal-binding protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8C7QL76, A0A8K9UNG6
    Related
    ENSOMYP00000108030.1, ENSOMYT00000145789.1
    Conserved Domains (1) summary
    cd05299
    Location:17 → 335
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_036942721.1 → XP_036798616.1  C-terminal-binding protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A8K9XAY2
    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
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