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LOC110488217 alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110488217, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110488217
Gene description
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like
See related
Ensembl:ENSOMYG00000012245
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110488217 in Genome Data Viewer
Location:
chromosome: 32
Exon count:
9
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 32 NC_050572.1 (28489470..28505538, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 14 NC_035090.1 (23745289..23761762, complement)

Chromosome 32 - NC_050572.1Genomic Context describing neighboring genes Neighboring gene LIX1-like protein Neighboring gene type-4 ice-structuring protein Neighboring gene U6atac minor spliceosomal RNA Neighboring gene ras/Rap GTPase-activating protein SynGAP Neighboring gene tropomyosin alpha-3 chain

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_050572.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    28489470..28505538 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021560337.2 → XP_021416012.1  alpha-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1-like

    UniProtKB/TrEMBL
    A0A8C7VIS4
    Related
    ENSOMYP00000025958.2, ENSOMYT00000028398.2
    Conserved Domains (1) summary
    pfam00777
    Location:129 → 412
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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Molecular Biology Databases