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LOC110486524 galactose-3-O-sulfotransferase 2-like [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110486524, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110486524
Gene description
galactose-3-O-sulfotransferase 2-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110486524 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
3
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 13 NC_048577.1 (44955574..44959660, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 13 NC_035089.1 (41664551..41668740, complement)

Chromosome 13 - NC_048577.1Genomic Context describing neighboring genes Neighboring gene riboflavin-binding protein Neighboring gene microtubule-associated serine/threonine-protein kinase 1 Neighboring gene cysteine protease ATG4D Neighboring gene transcription activator BRG1 Neighboring gene low-density lipoprotein receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables galactosylceramide sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in glycolipid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
galactose-3-O-sulfotransferase 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048577.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    44955574..44959660 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021558191.2 → XP_021413866.1  galactose-3-O-sulfotransferase 2-like

    UniProtKB/TrEMBL
    A0A060X0D8
    Conserved Domains (1) summary
    cl22970
    Location:98 → 437
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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