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LOC110485598 beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase [ Oncorhynchus mykiss (rainbow trout) ]

Gene ID: 110485598, updated on 14-Dec-2023

Summary

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Gene symbol
LOC110485598
Gene description
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase
See related
Ensembl:ENSOMYG00000005851
Gene type
protein coding
RefSeq status
MODEL
Organism
Oncorhynchus mykiss
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Protacanthopterygii; Salmoniformes; Salmonidae; Salmoninae; Oncorhynchus
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Genomic context

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See LOC110485598 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
101 current USDA_OmykA_1.1 (GCF_013265735.2) 13 NC_048577.1 (9275802..9351916, complement)
100 previous assembly Omyk_1.0 (GCF_002163495.1) 13 NC_035089.1 (7804059..7808621, complement)

Chromosome 13 - NC_048577.1Genomic Context describing neighboring genes Neighboring gene transmembrane protease serine 6 Neighboring gene complement C1q tumor necrosis factor-related protein 1-like Neighboring gene TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 Neighboring gene amine sulfotransferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in N-acetylglucosamine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein N-linked glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Oncorhynchus mykiss Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OmykA_1.1 Primary Assembly

Genomic

  1. NC_048577.1 Reference USDA_OmykA_1.1 Primary Assembly

    Range
    9275802..9351916 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036940175.1 → XP_036796070.1  beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase

    UniProtKB/TrEMBL
    A0A8C7NSM5
    Related
    ENSOMYP00000011755.2, ENSOMYT00000013011.2
    Conserved Domains (2) summary
    pfam04724
    Location:311 → 620
    Glyco_transf_17; Glycosyltransferase family 17
    NF033913
    Location:77 → 227
    fibronec_FbpA; LPXTG-anchored fibronectin-binding protein FbpA
Nucleotide Protein
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