U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SCD5 stearoyl-CoA desaturase 5 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110480894, updated on 2-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
SCD5
Gene description
stearoyl-CoA desaturase 5
Locus tag
RLOC_00001967
See related
Ensembl:ENSLSDG00000007279
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See SCD5 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 4 NC_042569.1 (15780649..15805626)

Chromosome 4 - NC_042569.1Genomic Context describing neighboring genes Neighboring gene lin-54 DREAM MuvB core complex component Neighboring gene THAP domain containing 9 Neighboring gene SEC31 homolog A, COPII coat complex component Neighboring gene transmembrane protein 150C Neighboring gene uncharacterized LOC110480941 Neighboring gene enolase-phosphatase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042569.1 Chromosome 4 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables stearoyl-CoA 9-desaturase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in unsaturated fatty acid biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
stearoyl-CoA desaturase 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042569.1 Reference lonStrDom2 Primary Assembly

    Range
    15780649..15805626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021549209.2 → XP_021404884.1  stearoyl-CoA desaturase 5

    UniProtKB/TrEMBL
    A0A218V331
    Related
    ENSLSDP00000009848.1
    Conserved Domains (1) summary
    cd03505
    Location:47 → 287
    Delta9-FADS-like; The Delta9 Fatty Acid Desaturase (Delta9-FADS)-like CD includes the delta-9 and delta-11 acyl CoA desaturases found in various eukaryotes including vertebrates, insects, higher plants, and fungi. The delta-9 acyl-lipid desaturases are found in a wide ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.