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SI sucrase-isomaltase [ Lonchura striata (white-rumped munia) ]

Gene ID: 110480372, updated on 2-Oct-2024

Summary

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Gene symbol
SI
Gene description
sucrase-isomaltase
Locus tag
RLOC_00011864
See related
Ensembl:ENSLSDG00000003271
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
MGAM_0
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 9
Exon count:
47
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 9 NC_042575.1 (2693104..2736420, complement)

Chromosome 9 - NC_042575.1Genomic Context describing neighboring genes Neighboring gene serine palmitoyltransferase small subunit B Neighboring gene otolin 1 Neighboring gene uncharacterized LOC110480379 Neighboring gene SLIT and NTRK like family member 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042575.1 Chromosome 9 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables carbohydrate binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sucrase-isomaltase, intestinal
Names
Maltase-glucoamylase, intestinal

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042575.1 Reference lonStrDom2 Primary Assembly

    Range
    2693104..2736420 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021548245.1 → XP_021403920.1  sucrase-isomaltase, intestinal

    UniProtKB/TrEMBL
    A0A218V3F9
    Related
    ENSLSDP00000004225.1, ENSLSDT00000005011.1
    Conserved Domains (6) summary
    COG1501
    Location:134 → 882
    YicI; Alpha-glucosidase, glycosyl hydrolase family GH31 [Carbohydrate transport and metabolism]
    cd06602
    Location:326 → 689
    GH31_MGAM_SI_GAA; maltase-glucoamylase, sucrase-isomaltase, lysosomal acid alpha-glucosidase
    cd14752
    Location:1073 → 1194
    GH31_N; N-terminal domain of glycosyl hydrolase family 31 (GH31)
    pfam00088
    Location:48 → 90
    Trefoil; Trefoil (P-type) domain
    pfam01055
    Location:1175 → 1674
    Glyco_hydro_31; Glycosyl hydrolases family 31
    pfam16863
    Location:973 → 1086
    NtCtMGAM_N; N-terminal barrel of NtMGAM and CtMGAM, maltase-glucoamylase
Nucleotide Protein
Heading Accession and Version

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