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LOC110478952 torsin-1A-interacting protein 2 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110478952, updated on 2-Oct-2024

Summary

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Gene symbol
LOC110478952
Gene description
torsin-1A-interacting protein 2
Locus tag
RLOC_00013089
See related
Ensembl:ENSLSDG00000011224
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
TOR1AIP2
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Genomic context

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See LOC110478952 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 8 NC_042574.1 (3297664..3305397)

Chromosome 8 - NC_042574.1Genomic Context describing neighboring genes Neighboring gene quiescin sulfhydryl oxidase 1 Neighboring gene centrosomal protein 350 Neighboring gene torsin-1A-interacting protein 1 Neighboring gene ADAMTS-like protein 2 Neighboring gene protein FAM163A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042574.1 Chromosome 8 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042574.1 Reference lonStrDom2 Primary Assembly

    Range
    3297664..3305397
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021545891.1 → XP_021401566.1  torsin-1A-interacting protein 2 isoform X1

    Conserved Domains (1) summary
    pfam05609
    Location:102 → 540
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_021545892.1 → XP_021401567.1  torsin-1A-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A218V4V6
    Related
    ENSLSDP00000015598.1, ENSLSDT00000017707.1
    Conserved Domains (1) summary
    pfam05609
    Location:102 → 518
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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