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ZBTB6 zinc finger and BTB domain containing 6 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110477738, updated on 2-Oct-2024

Summary

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Gene symbol
ZBTB6
Gene description
zinc finger and BTB domain containing 6
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See ZBTB6 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 17 NC_042582.1 (9969545..9972699, complement)

Chromosome 17 - NC_042582.1Genomic Context describing neighboring genes Neighboring gene phosducin like Neighboring gene ring finger and CCCH-type domains 2 Neighboring gene small nucleolar RNA SNORD90 Neighboring gene zinc finger and BTB domain containing 26 Neighboring gene RAB GTPase activating protein 1 Neighboring gene G protein-coupled receptor 21

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042582.1 Chromosome 17 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042582.1 Reference lonStrDom2 Primary Assembly

    Range
    9969545..9972699 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021543805.1 → XP_021399480.1  zinc finger and BTB domain-containing protein 6

    Conserved Domains (4) summary
    COG5048
    Location:238 → 410
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:333 → 353
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:23 → 127
    BTB; BTB/POZ domain
    pfam13465
    Location:345 → 369
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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