U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

BCL6 BCL6 transcription repressor [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473899, updated on 2-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
BCL6
Gene description
BCL6 transcription repressor
Locus tag
RLOC_00003751
See related
Ensembl:ENSLSDG00000010021
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See BCL6 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 9 NC_042575.1 (10221883..10239188, complement)

Chromosome 9 - NC_042575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC116183974 Neighboring gene somatostatin Neighboring gene LIM domain containing preferred translocation partner in lipoma Neighboring gene uncharacterized LOC110473875

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_042575.1 Chromosome 9 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
B-cell lymphoma 6 protein
Names
B cell CLL/lymphoma 6
B-cell lymphoma 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042575.1 Reference lonStrDom2 Primary Assembly

    Range
    10221883..10239188 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536836.1 → XP_021392511.1  B-cell lymphoma 6 protein isoform X2

    UniProtKB/TrEMBL
    A0A218V8F2
    Related
    ENSLSDP00000013851.1, ENSLSDT00000015777.1
    Conserved Domains (3) summary
    sd00017
    Location:579 → 599
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:22 → 129
    BTB; BTB/POZ domain
    pfam13465
    Location:591 → 616
    zf-H2C2_2; Zinc-finger double domain

  2. XM_021536835.2 → XP_021392510.1  B-cell lymphoma 6 protein isoform X1

    Conserved Domains (3) summary
    sd00017
    Location:599 → 619
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00651
    Location:22 → 129
    BTB; BTB/POZ domain
    pfam13465
    Location:611 → 636
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.