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P3H2 prolyl 3-hydroxylase 2 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473861, updated on 2-Oct-2024

Summary

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Gene symbol
P3H2
Gene description
prolyl 3-hydroxylase 2
Locus tag
RLOC_00003755
See related
Ensembl:ENSLSDG00000010069
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
LEPREL1
Orthologs
human mouse all
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Genomic context

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See P3H2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 9 NC_042575.1 (11038235..11101004, complement)

Chromosome 9 - NC_042575.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110473876 Neighboring gene tumor protein p63 Neighboring gene claudin 1 Neighboring gene claudin 16

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042575.1 Chromosome 9 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables procollagen-proline 3-dioxygenase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042575.1 Reference lonStrDom2 Primary Assembly

    Range
    11038235..11101004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536785.1 → XP_021392460.1  prolyl 3-hydroxylase 2

    Related
    ENSLSDP00000013929.1, ENSLSDT00000015866.1
    Conserved Domains (1) summary
    smart00702
    Location:469 → 667
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
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