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CHST8 carbohydrate sulfotransferase 8 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473817, updated on 2-Oct-2024

Summary

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Gene symbol
CHST8
Gene description
carbohydrate sulfotransferase 8
Locus tag
RLOC_00002491
See related
Ensembl:ENSLSDG00000009465
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See CHST8 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 11 NC_042577.1 (20252076..20433026)

Chromosome 11 - NC_042577.1Genomic Context describing neighboring genes Neighboring gene peptidase D Neighboring gene uncharacterized LOC116184062 Neighboring gene small nucleolar RNA SNORA17 Neighboring gene transcription initiation factor TFIID subunit 4 Neighboring gene potassium channel tetramerization domain containing 15

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042577.1 Chromosome 11 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carbohydrate sulfotransferase 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042577.1 Reference lonStrDom2 Primary Assembly

    Range
    20252076..20433026
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021536687.1 → XP_021392362.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A218UIZ4
    Related
    ENSLSDP00000012997.1, ENSLSDT00000014862.1
    Conserved Domains (1) summary
    pfam03567
    Location:195 → 424
    Sulfotransfer_2; Sulfotransferase family

  2. XM_021536685.2 → XP_021392360.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A218UIZ4
    Conserved Domains (1) summary
    pfam03567
    Location:195 → 424
    Sulfotransfer_2; Sulfotransferase family

  3. XM_021536688.2 → XP_021392363.1  carbohydrate sulfotransferase 8 isoform X2

    Conserved Domains (1) summary
    pfam03567
    Location:194 → 423
    Sulfotransfer_2; Sulfotransferase family

  4. XM_021536686.1 → XP_021392361.1  carbohydrate sulfotransferase 8 isoform X1

    UniProtKB/TrEMBL
    A0A218UIZ4
    Related
    ENSLSDP00000012996.1, ENSLSDT00000014861.1
    Conserved Domains (1) summary
    pfam03567
    Location:195 → 424
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
Heading Accession and Version

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