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SFRP1 secreted frizzled related protein 1 [ Lonchura striata (white-rumped munia) ]

Gene ID: 110473380, updated on 2-Oct-2024

Summary

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Gene symbol
SFRP1
Gene description
secreted frizzled related protein 1
Locus tag
RLOC_00000786
See related
Ensembl:ENSLSDG00000006494
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Orthologs
human mouse all
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Genomic context

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See SFRP1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 22 NC_042587.1 (320871..335929)

Chromosome 22 - NC_042587.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 3C-B Neighboring gene GINS complex subunit 4 Neighboring gene golgin A7 Neighboring gene uncharacterized LOC116184419 Neighboring gene zinc finger matrin-type 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042587.1 Chromosome 22 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables Wnt-protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in non-canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
secreted frizzled-related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042587.1 Reference lonStrDom2 Primary Assembly

    Range
    320871..335929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021535863.1 → XP_021391538.1  secreted frizzled-related protein 1

    UniProtKB/TrEMBL
    A0A218UJ63
    Related
    ENSLSDP00000008697.1, ENSLSDT00000010094.1
    Conserved Domains (2) summary
    cd07443
    Location:49 → 172
    CRD_SFRP1; Cysteine-rich domain of the secreted frizzled-related protein 1 (SFRP1), a regulator of Wnt activity
    cd03580
    Location:180 → 287
    NTR_Sfrp1_like; NTR domain, Secreted frizzled-related protein (Sfrp) 1-like subfamily; composed of proteins similar to human Sfrp1, Sfrp2 and Sfrp5. Sfrps are soluble proteins containing an NTR domain C-terminal to a cysteine-rich Frizzled domain. They show diverse ...
Nucleotide Protein
Heading Accession and Version

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