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RPS3A ribosomal protein S3A [ Lonchura striata (white-rumped munia) ]

Gene ID: 110471697, updated on 2-Oct-2024

Summary

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Gene symbol
RPS3A
Gene description
ribosomal protein S3A
Locus tag
RLOC_00005862
Gene type
protein coding
RefSeq status
MODEL
Organism
Lonchura striata
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Neoaves; Telluraves; Australaves; Passeriformes; Passeroidea; Estrildidae; Estrildinae; Lonchura
Also known as
RPS3A_0
Orthologs
human mouse all
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Genomic context

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See RPS3A in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_09 current lonStrDom2 (GCF_005870125.1) 4 NC_042569.1 (28067231..28070813)

Chromosome 4 - NC_042569.1Genomic Context describing neighboring genes Neighboring gene PEAK1 related, kinase-activating pseudokinase 1 Neighboring gene ribonuclease CL2 Neighboring gene small nucleolar RNA SNORD73 Neighboring gene SH3 domain containing 19 Neighboring gene FHF complex subunit HOOK interacting protein 1A

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_042569.1 Chromosome 4 Reference lonStrDom2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein eS1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_005870125.1-RS_2024_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference lonStrDom2 Primary Assembly

Genomic

  1. NC_042569.1 Reference lonStrDom2 Primary Assembly

    Range
    28067231..28070813
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021532593.2 → XP_021388268.1  small ribosomal subunit protein eS1

    UniProtKB/TrEMBL
    A0A218UMG7
    Conserved Domains (1) summary
    pfam01015
    Location:21 → 221
    Ribosomal_S3Ae; Ribosomal S3Ae family
Nucleotide Protein
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