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LOC110459993 prolyl 3-hydroxylase 2-like [ Mizuhopecten yessoensis (Yesso scallop) ]

Gene ID: 110459993, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110459993
Gene description
prolyl 3-hydroxylase 2-like
Locus tag
KP79_PYT18799
See related
EnsemblRapid:LOC110459993
Gene type
protein coding
RefSeq status
MODEL
Organism
Mizuhopecten yessoensis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Mizuhopecten
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Genomic context

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See LOC110459993 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current ASM211388v2 (GCF_002113885.1) Unplaced Scaffold NW_018408465.1 (2139705..2174139, complement)

NW_018408465.1Genomic Context describing neighboring genes Neighboring gene SH3 domain-containing YSC84-like protein 1 Neighboring gene zinc finger protein 227-like Neighboring gene prolyl 3-hydroxylase 1-like Neighboring gene E3 ubiquitin-protein ligase Midline-1-like Neighboring gene uncharacterized LOC110459994

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018408465 Unplaced Scaffold Reference ASM211388v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables L-ascorbic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in collagen metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prolyl 3-hydroxylase 2-like
Names
Prolyl 3-hydroxylase 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mizuhopecten yessoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211388v2 Primary Assembly

Genomic

  1. NW_018408465.1 Reference ASM211388v2 Primary Assembly

    Range
    2139705..2174139 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021512668.1 → XP_021368343.1  prolyl 3-hydroxylase 2-like isoform X2

    Related
    XP_021368343.1, XM_021512668.1
    Conserved Domains (1) summary
    smart00702
    Location:417 → 531
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  2. XM_021512670.1 → XP_021368345.1  prolyl 3-hydroxylase 2-like isoform X4

    Related
    XP_021368345.1, XM_021512670.1
    Conserved Domains (1) summary
    smart00702
    Location:398 → 512
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  3. XM_021512669.1 → XP_021368344.1  prolyl 3-hydroxylase 2-like isoform X3

    Related
    XP_021368344.1, XM_021512669.1
    Conserved Domains (1) summary
    smart00702
    Location:413 → 527
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  4. XM_021512671.1 → XP_021368346.1  prolyl 3-hydroxylase 2-like isoform X5

    UniProtKB/TrEMBL
    A0A210Q3E2
    Related
    XP_021368346.1, XM_021512671.1
    Conserved Domains (1) summary
    smart00702
    Location:362 → 476
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues

  5. XM_021512667.1 → XP_021368342.1  prolyl 3-hydroxylase 2-like isoform X1

    Related
    XP_021368342.1, XM_021512667.1
    Conserved Domains (1) summary
    smart00702
    Location:544 → 658
    P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
Nucleotide Protein
Heading Accession and Version

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