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LOC110456136 torsin-1A-interacting protein 2-like [ Mizuhopecten yessoensis (Yesso scallop) ]

Gene ID: 110456136, updated on 21-Dec-2023

Summary

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Gene symbol
LOC110456136
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:LOC110456136
Gene type
protein coding
RefSeq status
MODEL
Organism
Mizuhopecten yessoensis
Lineage
Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Bivalvia; Autobranchia; Pteriomorphia; Pectinida; Pectinoidea; Pectinidae; Mizuhopecten
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Genomic context

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See LOC110456136 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
100 current ASM211388v2 (GCF_002113885.1) Unplaced Scaffold NW_018407597.1 (1073160..1076577)

NW_018407597.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC110456119 Neighboring gene probable phytanoyl-CoA dioxygenase Neighboring gene alpha-1A adrenergic receptor-like Neighboring gene uncharacterized LOC110456142 Neighboring gene serine protease inhibitor dipetalogastin-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_018407597 Unplaced Scaffold Reference ASM211388v2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mizuhopecten yessoensis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM211388v2 Primary Assembly

Genomic

  1. NW_018407597.1 Reference ASM211388v2 Primary Assembly

    Range
    1073160..1076577
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021506704.1 → XP_021362379.1  torsin-1A-interacting protein 2-like

    Related
    XP_021362379.1, XM_021506704.1
    Conserved Domains (1) summary
    pfam05609
    Location:77 → 387
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_021506703.1 → XP_021362378.1  torsin-1A-interacting protein 2-like

    Related
    XP_021362378.1, XM_021506703.1
    Conserved Domains (1) summary
    pfam05609
    Location:77 → 387
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  3. XM_021506702.1 → XP_021362377.1  torsin-1A-interacting protein 2-like

    Related
    XP_021362377.1, XM_021506702.1
    Conserved Domains (1) summary
    pfam05609
    Location:77 → 387
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein Strain
Heading Accession and Version

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