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LOC110366534 zinc finger protein 664 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 110366534, updated on 20-Aug-2024

Summary

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Gene symbol
LOC110366534
Gene description
zinc finger protein 664
See related
EnsemblRapid:ENSFHEG00000034694
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
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Genomic context

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See LOC110366534 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 10 NC_046370.1 (19754155..19760169)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234544.1 (521175..525362, complement)

Chromosome 10 - NC_046370.1Genomic Context describing neighboring genes Neighboring gene gastrula zinc finger protein XlCGF57.1 Neighboring gene zinc finger protein OZF Neighboring gene gastrula zinc finger protein XlCGF8.2DB Neighboring gene gastrula zinc finger protein XlCGF57.1-like Neighboring gene gastrula zinc finger protein XlCGF57.1 Neighboring gene zinc finger protein OZF

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of PcG protein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 664

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046370.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    19754155..19760169
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021308168.2 → XP_021163843.2  zinc finger protein 664

    Related
    ENSFHEP00000055776.1, ENSFHET00000070003.1
    Conserved Domains (4) summary
    COG5048
    Location:94 → 416
    COG5048; FOG: Zn-finger [General function prediction only]
    PTZ00423
    Location:28 → 126
    PTZ00423; glideosome-associated protein 45; Provisional
    sd00017
    Location:344 → 364
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:412 → 437
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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