U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC110366372 gastrula zinc finger protein XlCGF57.1 [ Fundulus heteroclitus (mummichog) ]

Gene ID: 110366372, updated on 20-Aug-2024

Summary

Go to the top of the page Help
Gene symbol
LOC110366372
Gene description
gastrula zinc finger protein XlCGF57.1
See related
EnsemblRapid:ENSFHEG00000025531
Gene type
protein coding
RefSeq status
MODEL
Organism
Fundulus heteroclitus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Atherinomorphae; Cyprinodontiformes; Fundulidae; Fundulus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC110366372 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
3
Annotation release Status Assembly Chr Location
102 current MU-UCD_Fhet_4.1 (GCF_011125445.2) 10 NC_046370.1 (19305351..19313125, complement)
101 previous assembly Fundulus_heteroclitus-3.0.2 (GCF_000826765.1) Unplaced Scaffold NW_012234544.1 (954372..962675)

Chromosome 10 - NC_046370.1Genomic Context describing neighboring genes Neighboring gene component of inhibitor of nuclear factor kappa B kinase complex Neighboring gene PH and SEC7 domain-containing protein 1 Neighboring gene gastrula zinc finger protein XlCGF57.1 Neighboring gene oocyte zinc finger protein XlCOF6.1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
gastrula zinc finger protein XlCGF57.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Fundulus heteroclitus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference MU-UCD_Fhet_4.1 Primary Assembly

Genomic

  1. NC_046370.1 Reference MU-UCD_Fhet_4.1 Primary Assembly

    Range
    19305351..19313125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036142197.1 → XP_035998090.1  gastrula zinc finger protein XlCGF57.1

    Conserved Domains (3) summary
    COG5048
    Location:214 → 376
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:234 → 254
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:384 → 409
    zf-H2C2_2; Zinc-finger double domain

  2. XM_036142196.1 → XP_035998089.1  gastrula zinc finger protein XlCGF57.1

    Related
    ENSFHEP00000059171.1, ENSFHET00000061141.1
    Conserved Domains (3) summary
    COG5048
    Location:214 → 376
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:234 → 254
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam13465
    Location:384 → 409
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases