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LOC110335591 glycine N-methyltransferase [ Mus pahari (shrew mouse) ]

Gene ID: 110335591, updated on 9-Nov-2023

Summary

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Gene symbol
LOC110335591
Gene description
glycine N-methyltransferase
See related
Ensembl:MGP_PahariEiJ_G0020676
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
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Genomic context

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See LOC110335591 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
6
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 18 NC_034607.1 (14295264..14298549, complement)

Chromosome 18 - NC_034607.1Genomic Context describing neighboring genes Neighboring gene male-enhanced antigen 1 Neighboring gene protein phosphatase 2 regulatory subunit B'delta Neighboring gene peroxisomal biogenesis factor 6 Neighboring gene canopy FGF signaling regulator 3 Neighboring gene pre T cell antigen receptor alpha

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034607.1 Chromosome 18 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables S-adenosyl-L-methionine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine N-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables identical protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in S-adenosylhomocysteine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in S-adenosylmethionine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in one-carbon metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein homotetramerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of gluconeogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sarcosine metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycine N-methyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034607.1 Reference PAHARI_EIJ_v1.1

    Range
    14295264..14298549 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021217812.2 → XP_021073471.1  glycine N-methyltransferase

    Related
    MGP_PahariEiJ_P0044569, MGP_PahariEiJ_T0044569.1
    Conserved Domains (2) summary
    COG4976
    Location:16 → 95
    COG4976; Predicted methyltransferase, contains TPR repeat [General function prediction only]
    pfam13649
    Location:61 → 169
    Methyltransf_25; Methyltransferase domain
Nucleotide Protein
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