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Sil1 SIL1 nucleotide exchange factor [ Mus pahari (shrew mouse) ]

Gene ID: 110333136, updated on 15-Mar-2024

Summary

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Gene symbol
Sil1
Gene description
SIL1 nucleotide exchange factor
See related
Ensembl:MGP_PahariEiJ_G0018840
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
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Genomic context

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See Sil1 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
13
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 15 NC_034604.1 (30419154..30654153, complement)

Chromosome 15 - NC_034604.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD63 Neighboring gene heat shock protein family A (Hsp70) member 9 Neighboring gene catenin alpha 1 Neighboring gene leucine rich repeat transmembrane neuronal 2 Neighboring gene small nucleolar RNA U13 Neighboring gene high mobility group protein B1-like Neighboring gene uncharacterized LOC115065516 Neighboring gene small nucleolar RNA SNORA74 Neighboring gene matrin 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_034604.1 Chromosome 15 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
nucleotide exchange factor SIL1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034604.1 Reference PAHARI_EIJ_v1.1

    Range
    30419154..30654153 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021214585.1 → XP_021070244.1  nucleotide exchange factor SIL1 isoform X2

    Conserved Domains (2) summary
    PLN03200
    Location:230 → 332
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:186 → 213
    ARM; armadillo repeat [structural motif]

  2. XM_029547229.1 → XP_029403089.1  nucleotide exchange factor SIL1 isoform X2

    Conserved Domains (2) summary
    PLN03200
    Location:230 → 332
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:186 → 213
    ARM; armadillo repeat [structural motif]

  3. XM_029547228.1 → XP_029403088.1  nucleotide exchange factor SIL1 isoform X1

    Conserved Domains (2) summary
    PLN03200
    Location:243 → 345
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:199 → 226
    ARM; armadillo repeat [structural motif]

  4. XM_029547230.1 → XP_029403090.1  nucleotide exchange factor SIL1 isoform X2

    Related
    MGP_PahariEiJ_P0038920, MGP_PahariEiJ_T0038920.1
    Conserved Domains (2) summary
    PLN03200
    Location:230 → 332
    PLN03200; cellulose synthase-interactive protein; Provisional
    sd00043
    Location:186 → 213
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

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