U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Selenos selenoprotein S [ Mus pahari (shrew mouse) ]

Gene ID: 110328221, updated on 15-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
Selenos
Gene description
selenoprotein S
See related
Ensembl:MGP_PahariEiJ_G0013064
Gene type
protein coding
RefSeq status
MODEL
Organism
Mus pahari
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Coelomys
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See Selenos in Genome Data Viewer
Location:
chromosome: 1
Exon count:
6
Annotation release Status Assembly Chr Location
101 current PAHARI_EIJ_v1.1 (GCF_900095145.1) 1 NC_034590.1 (37971813..37982596)

Chromosome 1 - NC_034590.1Genomic Context describing neighboring genes Neighboring gene proprotein convertase subtilisin/kexin type 6 Neighboring gene small nuclear ribonucleoprotein polypeptide A' Neighboring gene eukaryotic translation initiation factor 1A-like Neighboring gene 60S ribosomal protein L5 pseudogene

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_034590.1 Chromosome 1 Reference PAHARI_EIJ_v1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum unfolded protein response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde protein transport, ER to cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Derlin-1 retrotranslocation complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of Derlin-1-VIMP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
selenoprotein S

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Mus pahari Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference PAHARI_EIJ_v1.1

Genomic

  1. NC_034590.1 Reference PAHARI_EIJ_v1.1

    Range
    37971813..37982596
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021207630.1 → XP_021063289.1  selenoprotein S

    Related
    MGP_PahariEiJ_P0016867, MGP_PahariEiJ_T0016867.1
    Conserved Domains (1) summary
    pfam06936
    Location:1 → 188
    Selenoprotein_S; Selenoprotein S (SelS)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.